Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831977.1_cds_XP_016504734.1_18139
CDS Infomation

[gene=LOC107822689] [db_xref=GeneID:107822689] [protein=protease Do-like 1, chloroplastic] [protein_id=XP_016504734.1] [location=join(45661..46058,46590..46712,47233..47404,48272..48309,48923..49121,49338..49490,49695..49829,50209..50286)] [gbkey=CDS]
Sequence

ATGGCTGCATCTTCGCACTCCTTAGCTTCTTCTTCTTTCTTCTCCCGAAGTCGGAAATTT
TCCGGCTCAGCTCTAACTCCTCGATTTTCACTTCCTAAATCTCTACTTTGCCGGAAAATC
CCTGGTTTCGCCGGTGGTATTATCGCTACTCAACGGTGCTACTCTAATTGTGACCCTTCC
GATGACCAGTCCAACTCCGGAAAGAAACTTCTGGAAACTATTTTTGTGGCTTGTACCTCC
GTTGCCTTGTCTTTCTCTCTATTTCTGACCGATGTTGACCCTGCCTCGGCTTTTGTAGTC
ACATCACCGCGGAAATTGCAGACCGATGAACTTGCTACTGTTCGCCTCTTCCGGGAGAAT
ACGCCTTCTGTTGTCTACATTACAAATCTCGCTTCCAGGCAAGACATGTTCACACTAGAT
GTATTTGAGGTGCCTCAAGGGTCCGGATCAGGATTCGTCTGGGATAAGGACGGTCATATT
GTCACCAATTATCATGTGATTCGAGGTGCCTCTGATCTCAGAGTGACTCTTGCTGATCAG
ACTACTTATGATGCAAAAGTTGTTGGATTTGACCAAGATAAAGATGTTGCTGTGCTGAAA
ATTGATGCGCCGAAAGACAAGATGAGACCTATACCAATTGGCGTGTCTGCAGACTTGCTT
GTTGGTCAGAAAGTATTTGCTATTGGAAATCCGTTTGGACTTGATCATACACTCACCACT
GGAGTCATCAGTGGCCTGAGGAGAGAAATTAATTCTGCAGCTACTGGCCGTCCAATCCAG
GATGTTATTCAGACAGACGCAGCAATTAATCCCGGTAACAGCGGAGGACCACTTCTAGAC
AGTTCAGGAAATCTTATTGGAATAAATACTGCTATATACTCTCCTTCTGGTGCATCATCT
GGTGTTGGATTTTCAATTCCAGTTGATACTGTTAGTGGGATTGTTGATCAATTGGTAAAG
TTTGGGAAAGTCACAAGGCCAATTTTGGGCATAAAATTCGCACCTGATCAGTCTGTTGAG
CAACTGGGAGTCAGTGGAGTACTTGTCTTGGATGCTCCTCCAAATGGTCCAGCGGGCAAA
GCGGGTCTTCTACCTACTAAACGTGATGCCTATGGAAGACTAGTTTTAGGTGATATAATT
ACATCTATAAATGGAAAGAAGGTCTCTAATGGCACCGACTTGTACAGAATTCTTGACCAG
TGCAAAGTGGGAGAAAAGGTGATTGTGGAAGTGCTACGTGGGGATCAAAAGGAGAAGATC
CCTGTACTTTTGGAACCGAAGCCTGAGGAATCGTAG

Peptide Sequence

PEP ID

XP_016504734.1
PEP Infomation

PREDICTED: protease Do-like 1, chloroplastic [Nicotiana tabacum]
Sequence

MAASSHSLASSSFFSRSRKFSGSALTPRFSLPKSLLCRKIPGFAGGIIATQRCYSNCDPS
DDQSNSGKKLLETIFVACTSVALSFSLFLTDVDPASAFVVTSPRKLQTDELATVRLFREN
TPSVVYITNLASRQDMFTLDVFEVPQGSGSGFVWDKDGHIVTNYHVIRGASDLRVTLADQ
TTYDAKVVGFDQDKDVAVLKIDAPKDKMRPIPIGVSADLLVGQKVFAIGNPFGLDHTLTT
GVISGLRREINSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGNLIGINTAIYSPSGASS
GVGFSIPVDTVSGIVDQLVKFGKVTRPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGK
AGLLPTKRDAYGRLVLGDIITSINGKKVSNGTDLYRILDQCKVGEKVIVEVLRGDQKEKI
PVLLEPKPEES

Transcript Sequence

Gene sequence data has not been registered.